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  1. Ye X, Fu Z, Wang H, Du W, Wang R, Sun Y, Gao Q, He J. A computerized system for signal detection in spontaneous reporting system in Shanghai China. Pharmacoepidemiol drug saf 2009; 18(2):154-158.
  2. Ye XF, He J. The bright future of Chinese herbal medicine: only after a twisty road. Contemp clin trials. 2010;31(6):508-509.
  3. Ye XF, Liu H, Wu C, Qin YY, Zang JJ, Gao QB, Zhang XJ, He J. Proton pump inhibitors therapy and risk of hip fracture: a systematic review and meta-analysis. European Journal of Gastroenterology & Hepatology. 2011;23(9):794-800.
  4. Wang H, Ye X, Gao Q, Wu C, Qian Y, Luo B, Sun Y, He J. Pharmacovigilance in Traditional Chinese Medicine safety surveillance. Pharmacoepidemiol Drug Saf 2009; 18(5): 357-361.(co-first author)
  5. Qian Y, Ye X, Du W, Ren J, Sun Y, Wang H, Luo B, Gao Q, Wu M, He J. A computerized system for detecting signals due to drug-drug interactions in spontaneous reporting system. British Journal of Clinical Pharmacology 2010; 69(1): 67-73.(co-first author)
  6. Qin YY, Li H, Guo XJ, Ye XF, Wei X, Zhou YH, Zhang XJ, Wang C, Qian W, Lu J, He J.Adjuvant chemotherapy, with or without taxanes, in early or operable breast cancer: a meta-analysis . PLoS One 2011;6(11):e26946.(co-first author)
  7. Gao QB, Zhao HY,Ye XF, He J. Prediction of pattern recognition receptors using pseudo-amino acid compisition. Biochemical and Biophysical Research Communications,2012; 417:73-77.
  8. Wang C, Guo XJ, Xu JF, Wu C, Sun YL, Ye XF, Qian W, Ma XQ, Du WM, He J. Exploration of the association rules mining technique for the signal detection of adverse drug events in spontaneous reporting systems. PLoS One, 2012;7(7):e40561.
  9. Zhou YH, Ma XQ, Wu C, Lu J, Zhang SS, Guo J, Wu SQ, Ye XF, Xu JF, He J. Effect of anti-obesity drug on cardiovascular risk factors: a systematic review and meta-analysis of randomized controlled trials. PLoS One 2012;7(6):e39062.
  10. Zhou YH, Wei X, Lu J, Ye XF, Wu MJ, Xu JF, Qin YY, He J. Effects of combined aspirin and clopidogrel therapy on cardiovascular outcomes: a systematic review and meta-analysis.PLoS One, 2012;7(2):e31642.
  11. Gao QB, Jin ZC, Ye XF, Wu C, Lu J, He J. Improving the classification of nuclear receptors with feature selection. Protein & Peptide Letters, 2009;16:823-829.
  12. Gao QB, Jin ZC, Ye XF, Wu C, He J. Prediction of nuclear receptors with optimal pseudo amino acid composition.Analytical Biochemistry,2009;387:54-59.
  13. Yang Z, Han G, Wu Q, Ye X, Jin Z, Yin Z, Qi X, Bai M, Wu K, Fan D. Patency and clinical outcomes of transjugular intrahepatic portosystemic shunt with polytetrafluoroethylene-covered stents versus bare stents: A meta-analysis. Journal of Gastroenterology and Hepatology 2010; 25: 1718–1725.
  14. Xiao L, He Q, Guo Y, Zhang J, Nie F, Li Y, Ye X, Zhang L.Cyanea capillata tentacle-only extract as a potential alternative of nematocyst venom: its cardiovascular toxicity and tolerance to isolation and purification procedures.Toxicon 2009;53(1):146-52.